The citric acid cycle (CAC) is a key metabolic pathway that occurs in the mitochondria of cells. It involves the oxidation of acetyl-CoA derived from carbohydrates, fats, and proteins to carbon dioxide. During each turn of the cycle, NAD+ and FAD are reduced to NADH and FADH2 to generate energy in the form of ATP through oxidative phosphorylation. Overall, the complete oxidation of one acetyl-CoA molecule in the CAC and respiratory chain produces 12 ATP molecules, capturing the energy from nutrients. The cycle plays a central role in cellular respiration and the production of energy.
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Citric Acid Cycle: The Central Oxidative Pathway
1. Citric Acid Cycle
R.C. Gupta
Professor and Head
Dept. of Biochemistry
National Institute of Medical Sciences
Jaipur, India
2. Citric acid cycle (CAC) is a metabolic
pathway in which acetyl CoA is oxidized
Acetyl CoA is obtained from diverse
sources
Intermediates of this pathway can be used
to synthesize a variety of compounds
CAC is a cyclic pathway
3. Several scientists contributed
to the discovery of citric acid
cycle
The complete cycle was
described by Hans Adolf
Krebs
Hans A. Krebs
4. âą Krebs cycle
âą Tricarboxylic acid cycle
âą Central oxidative pathway
Citric
acid
cycle is
also
known
as:
EMB-RCG
5. Location
The pathway is present in all the
cells having mitochondria
Enzymes of this pathway are
located in the mitochondria
EMB-RCG
6. Acetyl CoA, a two-carbon compound
With the condensation of:
The cycle begins ...
Citrate, a six-carbon compound
to form:
Oxaloacetate, a four-carbon compound
with
7. By a series of reactions âŠ
Citrate is re-converted into oxaloacetate
These are oxidized to water in the
respiratory chain
A number of reducing equivalents are
also removed
Two carbon atoms are removed as
carbon dioxide in these reactions
9. CAC begins with the entry of acetyl group
Sources of oxaloacetate
Hence, there is no net utilization of
oxaloacetate in CAC
But oxaloacetate is regenerated at the end
Oxaloacetate is the acceptor of acetyl group
10. But to increase the overall rate of
CAC reactions, the concentration of
intermediates has to be raised
Reactions which lead to net entry of
intermediates into the cycle are known
as anaplerotic reactions
11. An important anaplerotic reaction is
synthesis of oxaloacetate from pyruvate
ATP provides energy for the formation
of covalent bond
Biotin is required as a coenzyme
This reaction is catalysed by pyruvate
carboxylase
12. Pyruvate carboxylase is an allosteric
enzyme; it is activated by acetyl CoA
CH â C3 â COOH + CO2 + ATP
Pyruvate
carboxylase Biotin
O = C â COOH
|
CH â COOH + ADP + Pi2
Oxaloacetate
O
||
Pyruvate
13. Oxaloacetate is also formed by a trans-
amination reaction between aspartate
and a-ketoglutarate
H2NâCHâCOOH
|
CH2âCOOH
Aspartate
GOT, PLP
O=CâCOOH
|
CH2âCOOH
Oxaloacetate
O
||
HOOCâCH2âCH2âCâCOOH
a-Ketoglutarate
NH2
|
HOOCâCH2âCH2âCHâCOOH
Glutamate
14. However, the transamination reaction
is not anaplerotic
One intermediate of citric acid cycle,
oxaloacetate, is formed at the
expense of another, a-ketoglutarate
15. Sources of acetyl CoA
Acetyl CoA occupies a unique place in
metabolism
It can be formed from:
Glucose Fatty acids Amino acids
EMB-RCG
16. Pyruvate is an important source of
acetyl CoA
Pyruvate is formed from glucose, lactate
and some amino acids
Amino acids forming pyruvate are
glycine, alanine, serine, threonine,
cysteine, tryptophan and hydroxyproline
17. Fatty acid are converted into acetyl CoA
by b-oxidation
Ketone bodies are also converted into
acetyl CoA
Some amino acids are directly
converted into acetyl CoA
Such amino acids are phenylalanine,
tyrosine, tryptophan, lysine and leucine
18. Oxidative decarboxylation of pyruvate
Pyruvate formed from various compounds
can be converted into acetyl CoA
Conversion of pyruvate into acetyl CoA
occurs by oxidative decarboxylation
19. Oxidative decarboxylation occurs by a
series of reactions in mitochondria
These reactions are catalysed by
pyruvate dehydrogenase complex
The complex consists of three enzymes
and requires five coenzymes
21. CH3â Câ COOH
O
|| ïȘ
T â H
CH3â Câ COOH
OH
|
|
T CO2
CH3â Câ H
OH
|
|
TPyruvate
Thiamin pyro-
phosphate
CoA â SH
Coenzyme A
O L
||
CH3 â C ~ S SH
S-Acetyl lipoic
acid
L
S â S
Oxidised
lipoic acid
O
||
CH3â C ~ Sâ CoA
Acetyl CoA
L
SH SH
Reduced
lipoic acid
FAD FADH2
NADH+ + H NAD +
ï«
ïŹ
ï
ïź
ïŻ
EMB-RCG
22. Reactions 1 and 2 are catalysed by
pyruvate dehydrogenase
Reactions 3 and 4 are catalysed by
dihydrolipoyl acetyl transferase
Reactions 5 and 6 are catalysed by
dihydrolipoyl dehydrogenase
EMB-RCG
Note: Lipoic acid is bonded to a lysine
residue of dihydrolipoyl acetyl transferase
23. CH3âCâ COOH + CoA â SH + NAD+ â
O
||
CH3âC ~ S â CoA + NADH + H+ + CO2
O
||
The net reaction catalysed by
pyruvate dehydrogenase complex
24. A major fate of acetyl CoA is its
oxidation in the citric acid cycle
This produces a large amount of
energy in the form of ATP
Fate of acetyl CoA
EMB-RCG
25. When energy is not required, acetyl CoA is
used to synthesize fatty acids
Small amounts are used for various
acetylation reactions and for synthesis of:
Cholesterol
Steroid hormones
Vitamin D
Ketone bodies
EMB-RCG
26. Reactions of citric acid cycle
In the first reaction of the cycle, acetyl CoA
reacts with oxaloacetate
The acetyl group is transferred from acetyl
CoA to oxaloacetate forming citrate
CoA is released
The reaction is catalysed by citrate
synthetase
27. The high-energy thio-ester bond of
acetyl CoA is broken in this reaction
This releases free energy which ensures
that the reaction proceeds in the forward
direction only
EMB-RCG
28. O = C â COOH
|
CH2 â COOH
Citrate
synthetase
O
||
CH3 â C ~ S â CoA + H2O
CoA â SH
|
HO â C â COOH
|
Citrate
Acetyl CoA
Oxaloacetate
CH2 â COOH
CH2 â COOH
EMB-RCG
29. In the second reaction, aconitase removes
a molecule of water from citrate
Citrate is converted into cis-aconitate
This reaction is inhibited by fluoro-acetate
EMB-RCG
31. In the third reaction, a water molecule is
added back to cis-aconitate by aconitase
The net result of this and the preceding
reaction is that the position of the âOH
group is shifted
Citrate is converted into isocitrate
EMB-RCG
33. In the fourth reaction, isocitrate is
dehydrogenated to oxalosuccinate
The reaction is catalysed by isocitrate
dehydrogenase
Isocitrate dehydrogenase is present in
mitochondria as well as cytosol
EMB-RCG
34. Mitochondrial isocitrate dehydrogenase uses
NAD as an acceptor of reducing equivalents
Cytosolic isocitrate dehydrogenase uses
NADP as an acceptor of reducing equivalents
EMB-RCG
35. HO â CH â COOH
Isocitrate
dehydrogenase
CH2â COOH
|
CH â COOH
|
O = C â COOH
CH2â COOH
|
CH â COOH
|
Isocitrate
NAD
+
NADH + H
+
Oxalosuccinate
36. In the fifth reaction, oxalosuccinate is
decarboxylated to a-ketoglutarate
The reaction is catalysed by isocitrate
dehydrogenase in the presence of Mn++
This is the first reaction of the cycle in
which a carbon atom is removed as
carbon dioxide
EMB-RCG
37. CH â COOH2
|
CH2
|
O = C â COOH
CH â COOH2
|
CH â COOH
|
O = C â COOH
Oxalosuccinate
CO2
a-Ketoglutarate
Isocitrate
dehydrogenase, Mn++
38. In the sixth reaction, a-ketoglutarate
undergoes oxidative decarboxylation to
succinyl CoA
This reaction is analogous to oxidative
decarboxylation of pyruvate to acetyl CoA
It is catalysed by a-ketoglutarate
dehydrogenase complex
EMB-RCG
41. This is the second reaction in which a
carbon atom is removed
This is also an example of substrate-linked
oxidative phosphorylation
Energy released during oxidation of a-keto-
glutarate is used to form a high-energy thio-
ester bond
42. The seventh reaction is splitting of succinyl
CoA into succinate and CoA
It is catalysed by succinate thiokinase
(succinyl CoA synthetase)
The energy released in the reaction is used
to phosphorylate GDP to GTP
GTP can transfer a high-energy phosphate
to ADP forming ATP
43. GDP + Pi
Succinate
thiokinase
CH2 â COOH
|
CH2 âCOOH
CH2 â COOH
|
CH2
|
O = C ~ S â CoA
Succinyl CoA
Succinate
GTP + CoAâSH
44. Succinate is a four-carbon dicarboxylic
acid
It is converted into oxaloacetate, another
four-carbon dicarboxylic acid
The conversion occurs by a series of
reactions
45. In the eighth reaction, two hydrogen atoms
are transferred from succinate to FAD
The reaction is catalysed by succinate
dehydrogenase
Succinate dehydrogenase is a flavo-
protein having FAD as a prosthetic group
47. Fumarase
HO â CH â COOH
|
CH2 â COOH
H â C â COOH
||
HOOC â C â H
Fumarate
H2O
L-Malate
In the ninth reaction, fumarate is
hydrated to L-malate by fumarase
48. In the tenth reaction, L-malate is dehydro-
genated to oxaloacetate by malate
dehydrogenase
NAD accepts the reducing equivalents
Thus, oxaloacetate is regenerated and
acetyl CoA is oxidised
49. Malate
dehydrogenase
O ââ C â COOH
|
CH2 â COOH
HO â CH â COOH
|
CH2 â COOH
L-Malate
NAD+
NADH + H+
Oxaloacetate
50. Citric acid cycle
Oxaloacetate Acetyl CoA
CoA
Citrate
cis-Aconitate
Isocitrate
Oxalosuccinate
CO2
a-Ketoglutarate
CoA
Succinyl CoA
GDP+Pi
CoA+GTP
Succinate
FAD
FADH2
Fumarate
H2O
L-Malate
NAD+
NADH + H+
NAD+
NAD+
NADH+H+
NADH + H+
H2O
H2O
H2O
CO2
51. During complete oxidation of one molecule of
acetyl Co A in citric acid cycle:
These are oxidised in the respiratory chain
Energetics
Three molecules of NAD are reduced
One molecule of FAD is reduced
52. Oxidation of three molecules of NADH will
phosphorylate nine molecules of ADP to ATP
Oxidation of one molecule of FADH2 will
phosphorylate two molecules of ADP to ATP
Thus, 11 ATP equivalents are formed by
oxidative phosphorylation in the respiratory
chain per molecule of acetyl Co A oxidised
53. One GTP is formed when succinyl CoA is
converted into succinate
This, in turn, can convert one ADP into one
ATP
Thus, 12 ATP equivalents are formed on
complete oxidation of one molecule of acetyl
CoA in citric acid cycle and respiratory chain
54. Succinyl CoA
to succinate
Isocitrate to
oxaloacetate NAD+ïź NADH 3 ATP equivalents
Reaction Change in
coenzyme
Energy
captured
a-Ketoglutarate
to succinyl CoA NAD+ïź NADH 3 ATP equivalents
Malate to
oxaloacetate 3 ATP equivalentsNAD+ïź NADH
2 ATP equivalentsFAD ïź FADH2
Succinate to
fumarate
1 ATP equivalentGDPïź GTP
12 ATP equivalentsNet gain
55. Eight ATP equivalents are formed when one
molecule of glucose is oxidised to two
molecules of pyruvate
One molecule of NAD is reduced when
pyruvate is converted into acetyl CoA
This will form three ATP equivalents when it is
oxidised in the respiratory chain
Energetics of oxidation of glucose
56. Conversion of two pyruvate molecules into
acetyl CoA will form 6 ATP equivalents
Oxidation of two acetyl CoA molecules in CAC
will form 24 ATP equivalents
Thus, total ATP equivalents formed from
complete oxidation of glucose are 8+6+24=38
57. Energy of hydrolysis of the terminal phosphate
bond of ATP is 7.3 kcal/mol
38 ATP equivalents represent a capture of
38x7.3 = 277.4 kcal energy per mol of glucose
Efficiency of oxidation
58. Potential energy present in glucose is 686
kcal per mol
Hence, efficiency of oxidation of glucose is
277.4 ïž 686 ïŽ 100% or nearly 40%
59. Importance of citric acid cycle
âą Final catabolic pathway for
carbohydrates, lipids and proteins
âą Glucose, fatty acids and many
amino acids can be synthesized from
intermediates of the cycle
âą Capture of energy as ATP
60. All the carbohydrates can be converted
into glucose
Glucose is converted into pyruvate in the
glycolytic pathway
Pyruvate can enter citric acid cycle after its
conversion into acetyl CoA
Catabolic function
61. Oxidation of fatty acids produces acetyl
CoA which is oxidised in the CAC
Propionyl CoA is formed from fatty acids
having an odd number of carbon atoms
Propionyl CoA is converted into succinyl
CoA which is an intermediate of CAC
63. Several amino acids are converted into
pyruvate
These are glycine, alanine, serine,
threonine, cysteine, tryptophan and
hydroxyproline
Pyruvate is converted into acetyl CoA
which enters the citric acid cycle
64. Glutamine, arginine, histidine and proline
can be converted into glutamate
Glutamate can be converted into a-keto-
glutarate, an intermediate of CAC
Thus, these five amino acids can enter the
cycle as a-ketoglutarate
65. Valine, isoleucine and methionine can enter
CAC as succinyl CoA
Phenylalanine and tyrosine are partially
converted into fumarate, an intermediate
Asparagine and aspartate can enter the
cycle as oxaloacetate
Leucine and lysine enter as acetyl CoA
66. Anabolic function
Glucose, fatty acids and many amino
acids can be synthesized from inter-
mediates of citric acid cycle
Therefore, this cycle plays an important
role in interconversion of nutrients
67. All the intermediates of CAC can be
converted into oxaloacetate
Oxaloacetate is a substrates for gluco-
neogenesis
Therefore, glucose can be synthesized
from intermediates of citric acid cycle
68. Some intermediates can be trans-
aminated to amino acids
a-Ketoglutarate can be transaminated to
glutamate and oxaloacetate to aspartate
Some other amino acids can be formed
from these two
69. Fatty acids are synthesized from acetyl
CoA
Major source of acetyl CoA is pyruvate
Acetyl CoA is formed in mitochondria but
fatty acids are synthesised in cytosol
Acetyl CoA cannot traverse mitochondrial
membrane but citrate can
70. Acetyl CoA is converted into citrate in
the mitochondria
Citrate goes to cytosol, and is cleaved
into acetyl CoA and oxaloacetate
Acetyl CoA is used for fatty acid
synthesis
74. Capture of energy
Much of the energy is captured as ATP
when these fuels are oxidized in the
citric acid cycle
An important functions of citric acid
cycle is to capture the energy present
in carbohydrates, lipids and proteins
75. Regulation
The major function of citric acid cycle is
to capture energy
Availability of energy in the cell is the
major regulator of the pathway
In addition, some enzymes are allosteric
enzymes
76. The allosteric enzymes are:
Ca++ is the allosteric activator of all the
three
a-Ketoglutarate dehydrogenase
Isocitrate dehydrogenase
Citrate synthetase
77. The allosteric inhibitors are:
Enzyme Inhibitor
Citrate synthetase ATP and acyl CoA
Isocitrate
dehydrogenase
ATP and NADH
a-Ketoglutarate
dehydrogenase
NADH and succinyl
CoA
79. Glucose is major source of energy for brain
Pyruvate formed by glycolysis is converted
into acetyl CoA
Glucose is oxidized by glycolysis in brain
Regulation in brain
The fate of acetyl CoA is its oxidation in the
citric acid cycle
80. Rate of citric acid cycle reactions in brain
depends upon the availability of acetyl CoA
PDH complex is regulated by allosteric
mechanism as well as covalent modification
Availability of acetyl CoA depends upon
pyruvate dehydrogenase (PDH) complex
81. The components of PDH complex are:
Pyruvate dehydrogenase
Dihydrolipoyl dehydrogenase
Dihydrolipoyl acetyltransferase
82. Dihydrolipoyl acetyltransferase and dihydro-
lipoyl dehydrogenase are allosteric enzymes
Dihydrolipoyl dehydrogenase is
allosterically inhibited by NADH
Dihydrolipoyl acetyltransferase is
allosterically inhibited by acetyl CoA
83. PDH can exist in two forms: PDH-a and
PDH-b
PDH-b is the phosphorylated form
PDH-a is the dephosphorylated form
Pyruvate dehydrogenase (PDH) is
regulated by covalent modification
84. PDH-a is the active form; PDH-b is
the inactive form
PDH-b is dephosphorylated to PDH-a
by PDH phosphatase
PDH-a is phosphorylated to PDH-b by
PDH kinase
86. PDH kinase and PDH phosphatase are
allosteric enzymes
PDH phosphatase is activated by Ca++ and
Mg++
PDH kinase is activated by acetyl CoA,
NADH & ATP, and is inhibited by pyruvate
87. High concentrations of acetyl CoA, NADH and
ATP convert active PDH into inactive PDH
A high concentration of pyruvate has the
opposite effect
This, in turn, decreases the rate of citric acid
cycle reactions
Conversion of pyruvate into acetyl CoA is
decreased
88. ATP
PDH PDHâ
NADHAcetyl CoA
ï ï ï
ï ï -ï
ATP ADP
PDH kinase
Pyruvate
PDH phosphatase
Pi H2O
Mg
++
Ca
++
Insulin
(in adipose tissue)
EMB-RCG
â
89. In adipose tissue, insulin activates PDH
phosphatase
This increases the oxidative
decarboxylation of pyruvate into acetyl CoA
PDH phosphatase converts inactive PDH
into active PDH