Ehr models, standards and semantic interoperability
1. EHR models, standards and
semantic interoperability
David Moner
damoca@veratech.es
ELECTRONIC HEALTH RECORDS: A VIEW AT THE CURRENT DEVELOPMENTS OF HEALTHCARE DELIVERY MODELS
IN POLAND AND THE EU / ELEKTRONICZNA DOKUMENTACJA MEDYCZNA W POLSCE I EUROPIE
THE NATIONAL E-HEALTH CLUSTER CONFERENCE
ZAMEK TOPACZ, 6-7 AUGUST 2015
2. An interoperable world
• Technology allows us to be connected and to
have access to our data everywhere at every
time.
Why is this not true with health information?
EHR models, standards and semantic interoperability 2
3. Medicine vs. Medical Science
• In some aspects, medicine is still evolving
towards becoming a complete science.
– Other sciences, such as Mathematics, use
common models and notations since the XVI
century.
EHR models, standards and semantic interoperability 3
4. Medicine vs. Medical Science
Physiological and biological systems
Clinical reasoning
& decisions
Health observable
data
Virtual Physiological Human
Clinical information
models and
terminologies
Clinical decision
support systems and
clinical guidelines
EHR models, standards and semantic interoperability 4
5. Electronic Health Records
• The Electronic Health Record (EHR) is the main
source of information of health organizations.
– It is a complete electronic registry of all events
and data related to the health status of a person,
from birth to death.
It enables an efficient management
of clinical information
EHR models, standards and semantic interoperability 5
7. Electronic Health Records
• The Edwin Smith
papyrus is one of the
oldest medical
documents (1600 BC).
• For a computer, it is as
incomprehensible as
any other current
document.
EHR models, standards and semantic interoperability 7
8. Electronic Health Records
• We need to have models for the EHR (clinical
information models).
EHR models, standards and semantic interoperability 8
9. Modeling the EHR
• A model is an abstract representation of
systems, processes and data that helps in
interpreting and implementing them.
– It is a reference to be followed to build (EHR)
information systems.
EHR models, standards and semantic interoperability 9
11. Modeling the EHR
• The problems we are facing are:
– Health data is complex.
– Health data is variable.
– Health data has specific semantics.
How can we agree on common
formats and models?
How can we share our data
and reuse other’s data?
EHR models, standards and semantic interoperability 11
12. Modeling the EHR
• It is not about creating and using a single and
universal EHR system for everybody.
EHR models, standards and semantic interoperability 12
Finally standardization
was achieved…
13. Modeling the EHR
• We need to create models that are
semantically interoperable.
– Semantic interoperability is the ability of sharing,
aggregating, analyzing and using external
information automatically and in a meaningful
way.
00100101110
EHR models, standards and semantic interoperability 13
15. Modeling the EHR
SYSTEM A SYSTEM B
Health
information
Structure A
Model A
Language A
Structure B
Model B
Language B
Context A Context B
?
Reference Model
Clinical inf. models
Terminology
EHR models, standards and semantic interoperability 15
16. Modeling the EHR
• A Reference Model provides the syntax (basic
data structure and data types) to represent
any kind of health information in the EHR.
EHR models, standards and semantic interoperability 16
17. Modeling the EHR
• How can we avoid building a nonsense?
EHR models, standards and semantic interoperability 17
18. Modeling the EHR
• We need blueprints or guides that define the
specific configuration of the EHR information.
– Clinical information models or archetypes
EHR models, standards and semantic interoperability 18
19. Modeling the EHR
Real data
Archetype
(a model of data structures
with an specific meaning)
EHR models, standards and semantic interoperability 19
20. Modeling the EHR
• Standards such as ISO 13606 for the
communication of the EHR, or the openEHR
specifications provide both a reference model
and an archetype model.
+
EHR models, standards and semantic interoperability 20
21. Modeling the EHR
• We have libraries of archetypes ready to be
used. E.g. http://www.openehr.org/ckm/
EHR models, standards and semantic interoperability 21
22. Modeling the EHR
• It is not enough to have a reference model
and archetypes, we need another piece:
terminologies.
– They provide the semantic description of the data
and the models.
– They provide a subset of possible data values (e.g.
the set of possible diagnosis or allergies).
EHR models, standards and semantic interoperability 22
23. Modeling the EHR
25571000000103
(Discharge report)
SNOMED-CT
85097005
(Secondary diagnosis )
…
89100005
(Final diagnosis - discharge)
EHR models, standards and semantic interoperability 23
24. Modeling the EHR
EHR models, standards and semantic interoperability 24
Referencemodel
Archetypes
Terminologies
Semantic interoperability
26. From theory to practice
Technical University of
Valencia, Spain
ITACA Institute
Biomedical
Informatics Group
(IBIME)
• Spin-off SME company created
in 2010.
• Mission: to offer solutions and
technologies for clinical data
integration, standardization,
analysis and reuse.
www.veratech.es
EHR models, standards and semantic interoperability 26
27. From theory to practice
EHR models, standards and semantic interoperability 27
Reuse
28. • LinkEHR Normalization Platform
– A set of tools that facilitates the adoption of EHR
standards based on the use of archetypes.
– It works over existing EHR systems and data.
EHR models, standards and semantic interoperability 28
www.linkehr.com
Reuse
29. • Four main modules:
– LinkEHR Integration: distributed data integration
engine.
– LinkEHR Editor: reference model independent
archetype editor.
– LinkEHR Studio: transformation of existing legacy
data into archetype-compliant standardized data.
– Clinical Information Model Manager: management
and government of clinical models and
archetypes.
EHR models, standards and semantic interoperability 29
Reuse
30. • Spanish National EHR System
– Provides access to a patient
summary and to the most
relevant clinical documents of
the patients from 17 different
regions.
– 8 documents have been
modeled as ISO 13606
archetypes using LinkEHR
Editor.
EHR models, standards and semantic interoperability 30
www.msssi.gob.es/profesionales/hcdsns
• Population: 46 M
• Tourists: ~65 M/year
Reuse
31. EHR models, standards and semantic interoperability 31
Concept management system developed by VeraTech
Reuse
32. • Clinical Document models
for the National Unified EHR
– The objective is to provide
support for continuity of care.
– 9 documents are being
modeled as HL7 CDA
archetypes using LinkEHR
Editor.
EHR models, standards and semantic interoperability 32
• Population: 3.3 M
Reuse
33. • Shared EHR system (Madrid region, Spain)
– Objective: to build an EHR system based on ISO
13606 and archetypes for 5.5 million people.
– Fed by existing primary and specialized care EHR
systems. Data will be transformed using LinkEHR
Studio.
– The challenge is to maintain the relationships
between all the information.
EHR models, standards and semantic interoperability 33
Reuse
35. • Around 80% of clinical data
has quality problems.
• We are developing a web
service to automatically
evaluate several quality
dimensions: unicity,
correctness, consistency,
temporal stability…
Qualize (VeraTech)
Data quality automatic evaluation service.
(Public Beta available in October 2015)
EHR models, standards and semantic interoperability 35
Reuse
36. • Archetype-based data warehouse
environment
– Development of an integrated process for the
modeling, extraction, transformation and load
(METL) of existing health data into an archetype-
based data repository.
– Oriented to facilitate the reuse of health data.
EHR models, standards and semantic interoperability 36
Reuse
37. EHR models, standards and semantic interoperability 37
LIS Transformation
Legacy
XML
openEHR
compliant
data
openEHR data
repository
(Marand
Think!EHR)
Guide
queries
Applies
transformation and
aggregation rules
Archetypes
Define data
structures
Edits
Archetype-based data warehouse environment to enable the reuse of electronic health record data
Luis Marco-Ruiza, David Moner, José A. Maldonado, Nils Kolstrup, Johan G. Bellika
International Journal of Medical Informatics 84 (2015) 702–714
Reuse
38. • In Assisted Human Reproduction a
multiple pregnancy is a severe
problem due to premature births, low
birthweight babies and obstetric
problems.
• A Decision Support System was
developed to help in deciding how
many embryos needed to be
transferred.
– 8% decrease in multiple pregnancy
after the 6 first months.
Valencian Institute of Infertility
Each year it helps around 5,000 couples from 80 countries in
search of treatment in reproductive medicine.
EHR models, standards and semantic interoperability 38
Reuse
39. Conclusions
EHR models, standards and semantic interoperability 39
Reference model
Archetype
Archetype-
based data
repository
Original
data
Data
reuse
Describes
Guides
transformations
Guides
queries
+
40. Conclusions
(for SMEs)
• Success comes from solid foundations, long
term vision of needs and applied technology
and solutions for existing problems.
EHR models, standards and semantic interoperability 40