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Presented by
         Dr. B.Victor., Ph. D.
Email : bonfiliusvictor@gmail.com
  Blog: bonvictor.blogspot.com
Presentation outline
   Meaning and branches of
    histotechnology.
   Major steps in tissue
    processing
   Fixative –definition, kinds,
    characteristics.
   Micro-anatomical fixatives
   Principles of tissue fixation.
   Processing of tissues and
    tissue sections.
   Paraffin wax technique
   Types of microtomes
   Staining-types, double stains,
    acid stains, basic stains.
   Clearing tissue sections.
Meaning of histotechnology
 It is the preparation of tissues for
  microscopic examination.
 It is an effective diagnostic tool in clinical
  pathology.
 Histological preparations reveal normal
  tissue structure, tissue abnormalities and
  cancerous conditions.
Branches of histotechnology
 Histology- the microscopic study of the
  normal tissues.
 Histopathology – the microscopic study
  of tissues affected by disease.
 Histochemistry – the techniques provide
  information on the chemical composition
  of parts of tissues.
 Cytochemistry – the techniques provide
  information on the chemical composition
  of parts of cells.
Steps in the processing of tissues
1.   Fixation – preservation of tissues in its
     original condition.
2.   Dehydration – removal of water from
     tissues.
3.   Clearing – infiltration of paraffin solvent.
4.   Embedding – infiltration of paraffin wax.
5.   Microtomy – preparing thin slices of
     tissues.
6.   Staining – colouring of tissues.
7.   Mounting – arranging tissues on slides.
What is a fixative ?
   A fixative is described as a chemical
    substance which will preserve the shape,
    structure, relationship and chemical
    constituents of tissues and cells after
    death.
Purpose of fixing agents
1.   To kill and preserve living tissues.
2.   To stabilize the tissue and cell structure
     for subsequent treatments( wax
     embedding, sectioning, mounting).
3.   To prepare tissue for staining and optical
     contrast.
4.   To harden the tissue for section cutting
Requirements of a good fixative
1. Penetrate the tissue and cells rapidly and
   evenly.
2. Prevent autolysis and bacterial decomposition.
3. Preserve tissues in their natural state and fix
   all chemical cell components ( proteins,
   carbohydrates, fats etc.,)
4. Preserve cell volume.
Requirements of a good fixative
(Cont’d)
5.Avoid excessive hardness of fixed tissue.
6.Allow enhanced optical differentiation by
    staining.
7.Make the cellular components insoluble
    to liquids used in tissue processing.
8.Be nontoxic and non-allergenic
9.Providing iso-osmotic conditions to the
  tissues.
General principles of fixation
 Amount of fixing fluid should be approx.
  10 to 20 times more than the volume of
  tissue held in a container with a required
  fixation time.
 Temperature has an important effect.
 A lower temperature retard fixation –
  reduce autolytic reaction.
 A higher temperature will decrease the
  required for fixation but will increase
  autolysis.
Methods of Fixation
 Fixation by heat - this denatures and
  coagulates proteins resulting in some
  distortion but is useful in fixing smears.
 Cryostat (freezing) fixing - it does not
  denatures proteins and minimizes
  distortion. useful in locating particular
  chemicals - histochemistry
 Fixation by chemicals - chemical fixatives
  are used.
Kinds of fixatives

              Fixatives

Temperature                      Chemical
  fixation                        fixation


              Simple fixatives           Compound fixatives


                            Micro-anatomical              Cytological
                                fixatives                  fixatives

                                                                   Nuclear
                                                                   fixatives

                                                                 Cytoplasmic
                                                                  fixatives
Common fixatives

  Routine       Special
  Fixatives    fixatives

  Primary     Secondary
  fixatives    fixatives

   Simple     Fixation
  fixatives   mixtures
Simple fixatives or primary fixatives
    or unmixed fixatives
Formalin                           Ethyl alcohol
   non-coagulant fixative          Colourless liquid
   Acidic, cheap,                  Reducing agent
   easy to prepare,               Osmium tetroxide
   relatively stable               Strong oxidizing agent
                                    Expensive, poor penetration
Mercuric chloride
                                   Potassium dichromate
   Coagulant fixative,
                                    Strong fixative
   black precipitate in tissues
                                    Fix lipids
Glacial acetic acid                Trichloro acetic acid
   Protein precipitant,            Protein precipitant
   Colourless solution            Picric acid
   Pungent smell                   Protein precipitant
                                    Used as saturated solutions
Compound fixatives or fixation
mixtures


                Micro-anatomical
                    fixatives
   Compound                         Nuclear
    fixatives                       fixatives
                  Cytological
                   fixatives
                                   Cytoplasmic
                                    fixatives
Micro-anatomical fixatives

 10% formal saline
 10% neutral buffered formalin
 Heidenhain’s Susa
 Formal-sublimate
 Formal-saline sublimate
 Zenker’s fluid
 Helly’s fluid
 Bouin’s fluid
 Gendre’s fluid
Nuclear fixatives


Flemming’s   • Chromic acid (1%)-15 ml
             • Aqueous osmium tetroxide(2%)-4 ml
   fluid     • Glacial acetic acid- 1 ml



Carnoy’s     • Absolute alcohol- 60 ml
             • Chloroform – 30 ml
 fluid       • Glacial acetic acid – 10ml
Cytoplasmic fixatives
 Flemming’s
                • Chromic acid (1%) – 15 ml
Fluid without   • Aqueous osmium tetroxide (2%)-4 ml
 Acetic acid
                •   Mercuric chloride – 5 gm
                •   Potassium dichromate -2.5 gm
Helly’s fluid   •   Sodium sulphate – 1.0 gm
                •   Distilled water -100 ml
                •   5 ml of 40% formalin before use.



   Formal       • formalin
 Saline 10%     • Sodium chloride
Category of fixatives
         Mercury
                      • Zenker’s fluid
         fixative
        Chromate      • Helly’s
         fixative       fluid
        Picric acid   • Bouin’s
         fixative       fluid
         Alcohol      • Carnoy’s fluid
         Fixative
Physico-chemical features of
fixatives
    Degree of ionization
    Oxidation-reduction potential
    Reactions with proteins, lipids,
     carbohydrates
    Rate of penetration
    Shrinkage or swelling
    Degree of hardening
    Methods of washed out
    Effect on staining
    Compatibility with other fixatives
Processing of specimens


                   Processing
                   Of tissues
Processing of
 specimens
                  Processing of
                 Tissue sections
Processing of animal tissues

             Fix in appropriate fixative



           Wash in water / iodine alcohol



      Partially dehydrate in 30, 50, % grades of
              alcohol – 30 -90 mts each



             Store in 70 % or 80% alcohol
Processing of plant tissues
  Fix in FAA
   (formalin-acetic acid-alcohol)



       Wash in 50% alcohol


           Partially dehydrate in
           10, 20, 30, 40, 50 & 60%
           Alcohol grades – 20 mts each


                Store in 70% alcohol
Paraffin wax technique of
tissue blocks
 Dehydration-the alcohol method
                 -the acetone method
                 - the dioxane (diethylene
                 dioxide) method
 Clearing- de-alcoholisation -clearing
  agents- xylene, benzene, toluene,
  chloroform.
 Embedding- blocking – out in wax-wax
  impregnation
Paraffin wax technique of
tissue blocks
   wax-wax impregnation- It can be cold wax
    infiltration and melted wax infiltration.
   Complete wax infiltration is essential for the
    production of good sections.
   Hard tissues requires a higher melting point
    wax.
   Number wax changes and time in each wax
    change, depend upon the density and size of the
    tissue.
   Embedding media – wax, gelatin, celloidin,
    polyester wax.
Cutting of tissue sections or
microtomy
                                   Rotary
                                  microtome

                 Ordinary          Rocking
                 microtome        microtome

                 Freezing           Sliding
 microtome      Microtome/        microtome
                 cryostat

              Ultra - microtome
Microtomes
 The microtomes cut the tissue at a pre-
  determined uniform thickness.
 These instruments are designed for the
  accurate and serial cutting of thin slices of
  tissue.
 Several models are available – sliding,
  rotary, rocking ultra- thin microtomes.
Cambridge rocking microtome

                   It consists of a heavy base
                    and two arms ; the lower
                    arm rests on a column and
                    supports the upper, both
                    being pivoted on knife edges
                    which acts a fulcrum.
                   The upper arm carries the
                    block holder.
                   There is an adjustable cord.
                   The feed mechanism is
                    graduated in units of 1or 2
                    um.
The rotary microtome
           The section cutting is
            effected by the vertical rise
            and fall of the object against
            an fixed knife edge.
           The block holder is
            equipped with adjustable
            screws.
           The block is parallel to the
            microtome knife.
           The knife holder is movable.
The sliding microtome
   The block remains stationary, while the
    microtome knife moves during the process of
    sectioning.
The freezing microtome

                The optimum cutting
                 temperature is -20
                 degree Celsius.
                The freezing of the
                 tissues is done by the
                 carbon dioxide gas.
The cryostat
         Sectioning is done on
          unfixed tissue.
         The microtome is
          housed in a deep
          freezer cabinet.
         The temperature can
          be maintained
          between -15 to -30
          degree Celsius.
Paraffin processing of tissue

                Post-fixation      Initial
 fixation
                 treatment      dehydration




    Wax             De-          Complete
infiltration   alcoholization   dehydration




  Wax          Trimming the
                   block        microtomy
embedding
Processing of paraffin
      sections
                                                                        Hydration
                                                                      Down-grading –
Drying of sections               De-paraffinization
                                                                      Graded alcohol
                                                                          series




      Staining                       Dehydration
                                                                      De-alcoholization
 -primary staining                   Up-grading-
                                                                        And clearing
 -counter-staining               Graded alcohol series




                   Mounting
                                                      Observation
              In a medium with
                                                    In a microscope
                 Cover glass
Staining
 Staining is used to obtain contrast
  between the constituent parts of a tissue
  section.
 The depth of colouration is affected by
  chemical affinity, density, and permeability.
 Certain stains are metachromatic –i.e.
  they are capable of imparting one colour
  to certain constituents and another to
  others.
Mordanting
 The salts of certain metals are capable of
  radically alter the behavior of particular
  stains.
 These salts are called ‘mordants’.
 A mordant is capable entering into
  chemical combination with a stain.
 The resulting substance is called ‘a lake’.
Kinds of staining

 Progressive staining        Retrogressive staining
The tissue is left in the      The tissue is over
stain until the desired     stained and decolorized
   depth of color is          using differentiating
       obtained                     solution


   Direct staining             Counter staining
 The stain combines          Two stains are applied
  directly with cell        one by one with proper
     structures              destaining in-between.
Kinds of staining -2
Acidic                Basic               Neutral
stains                stains               stains
A colored organic    A colored organic
                                          A colored organic
 acid combined        base combined
                                            acid is linked
  with a metal.       with uncolored
                                           chemically to a
                     acetate, chloride
                                           colored organic
                        or sulphate
                                                base.
                          radical.
    These are
dissolved in water
    or alcohol.

                                          They are dissolved
                     They tend to stain
                                             in absolute
They tend to stain       nucleus.
                                               alcohol.
 the cytoplasm.
Common double stains

Animal    • Borax carmine and eosin Y
          • Haematoxylin and eosin Y
          • Haematoxylin and van
tissues     Geison stain



 Plant    • Haematoxylin and eosin
          • Safranin and light green
tissues   • Safranin and haematoxylin
Good general stain for
   animal tissues
stain           solvent            effect


Pico carmine    water              Nucleus-red
                                   Cytoplasm-yellow

Borax carmine   alcohol            Nucleus-pink


Delafield       alcohol            Nucleus - blue
haematoxylin

Haemalum        water              Nucleus - blue


Eosin Y         Water or alcohol   Cytoplasm - pink
Clearing agent



           • It makes the processed
Clearing     tissue transparent.
 agent     • Removes alcohol from
             tissue sections.
   Dr.B.Victor is a highly experienced professor,
    recently retired from the reputed educational
    institution- St. Xavier’ s College, Palayamkottai,
    India-627001.
   He was the dean of sciences, IQAC coordinator
    and assistant controller of examinations.
   He has more than 32 years of teaching and
    research experience
   He has taught a diversity of courses and guided
    12 Ph.D scholars.
   He is an expert in histological techniques and
    photo micrography.
    send your comments to :
    bonfiliusvictor@gmail.com
Thank you for watching

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Histological techniques for life science researchers

  • 1. Presented by Dr. B.Victor., Ph. D. Email : bonfiliusvictor@gmail.com Blog: bonvictor.blogspot.com
  • 2. Presentation outline  Meaning and branches of histotechnology.  Major steps in tissue processing  Fixative –definition, kinds, characteristics.  Micro-anatomical fixatives  Principles of tissue fixation.  Processing of tissues and tissue sections.  Paraffin wax technique  Types of microtomes  Staining-types, double stains, acid stains, basic stains.  Clearing tissue sections.
  • 3. Meaning of histotechnology  It is the preparation of tissues for microscopic examination.  It is an effective diagnostic tool in clinical pathology.  Histological preparations reveal normal tissue structure, tissue abnormalities and cancerous conditions.
  • 4. Branches of histotechnology  Histology- the microscopic study of the normal tissues.  Histopathology – the microscopic study of tissues affected by disease.  Histochemistry – the techniques provide information on the chemical composition of parts of tissues.  Cytochemistry – the techniques provide information on the chemical composition of parts of cells.
  • 5. Steps in the processing of tissues 1. Fixation – preservation of tissues in its original condition. 2. Dehydration – removal of water from tissues. 3. Clearing – infiltration of paraffin solvent. 4. Embedding – infiltration of paraffin wax. 5. Microtomy – preparing thin slices of tissues. 6. Staining – colouring of tissues. 7. Mounting – arranging tissues on slides.
  • 6. What is a fixative ?  A fixative is described as a chemical substance which will preserve the shape, structure, relationship and chemical constituents of tissues and cells after death.
  • 7. Purpose of fixing agents 1. To kill and preserve living tissues. 2. To stabilize the tissue and cell structure for subsequent treatments( wax embedding, sectioning, mounting). 3. To prepare tissue for staining and optical contrast. 4. To harden the tissue for section cutting
  • 8. Requirements of a good fixative 1. Penetrate the tissue and cells rapidly and evenly. 2. Prevent autolysis and bacterial decomposition. 3. Preserve tissues in their natural state and fix all chemical cell components ( proteins, carbohydrates, fats etc.,) 4. Preserve cell volume.
  • 9. Requirements of a good fixative (Cont’d) 5.Avoid excessive hardness of fixed tissue. 6.Allow enhanced optical differentiation by staining. 7.Make the cellular components insoluble to liquids used in tissue processing. 8.Be nontoxic and non-allergenic 9.Providing iso-osmotic conditions to the tissues.
  • 10. General principles of fixation  Amount of fixing fluid should be approx. 10 to 20 times more than the volume of tissue held in a container with a required fixation time.  Temperature has an important effect.  A lower temperature retard fixation – reduce autolytic reaction.  A higher temperature will decrease the required for fixation but will increase autolysis.
  • 11. Methods of Fixation  Fixation by heat - this denatures and coagulates proteins resulting in some distortion but is useful in fixing smears.  Cryostat (freezing) fixing - it does not denatures proteins and minimizes distortion. useful in locating particular chemicals - histochemistry  Fixation by chemicals - chemical fixatives are used.
  • 12. Kinds of fixatives Fixatives Temperature Chemical fixation fixation Simple fixatives Compound fixatives Micro-anatomical Cytological fixatives fixatives Nuclear fixatives Cytoplasmic fixatives
  • 13. Common fixatives Routine Special Fixatives fixatives Primary Secondary fixatives fixatives Simple Fixation fixatives mixtures
  • 14. Simple fixatives or primary fixatives or unmixed fixatives Formalin Ethyl alcohol  non-coagulant fixative  Colourless liquid  Acidic, cheap,  Reducing agent  easy to prepare, Osmium tetroxide  relatively stable  Strong oxidizing agent  Expensive, poor penetration Mercuric chloride Potassium dichromate  Coagulant fixative,  Strong fixative  black precipitate in tissues  Fix lipids Glacial acetic acid Trichloro acetic acid  Protein precipitant,  Protein precipitant  Colourless solution Picric acid  Pungent smell  Protein precipitant  Used as saturated solutions
  • 15. Compound fixatives or fixation mixtures Micro-anatomical fixatives Compound Nuclear fixatives fixatives Cytological fixatives Cytoplasmic fixatives
  • 16. Micro-anatomical fixatives  10% formal saline  10% neutral buffered formalin  Heidenhain’s Susa  Formal-sublimate  Formal-saline sublimate  Zenker’s fluid  Helly’s fluid  Bouin’s fluid  Gendre’s fluid
  • 17. Nuclear fixatives Flemming’s • Chromic acid (1%)-15 ml • Aqueous osmium tetroxide(2%)-4 ml fluid • Glacial acetic acid- 1 ml Carnoy’s • Absolute alcohol- 60 ml • Chloroform – 30 ml fluid • Glacial acetic acid – 10ml
  • 18. Cytoplasmic fixatives Flemming’s • Chromic acid (1%) – 15 ml Fluid without • Aqueous osmium tetroxide (2%)-4 ml Acetic acid • Mercuric chloride – 5 gm • Potassium dichromate -2.5 gm Helly’s fluid • Sodium sulphate – 1.0 gm • Distilled water -100 ml • 5 ml of 40% formalin before use. Formal • formalin Saline 10% • Sodium chloride
  • 19. Category of fixatives Mercury • Zenker’s fluid fixative Chromate • Helly’s fixative fluid Picric acid • Bouin’s fixative fluid Alcohol • Carnoy’s fluid Fixative
  • 20. Physico-chemical features of fixatives  Degree of ionization  Oxidation-reduction potential  Reactions with proteins, lipids, carbohydrates  Rate of penetration  Shrinkage or swelling  Degree of hardening  Methods of washed out  Effect on staining  Compatibility with other fixatives
  • 21. Processing of specimens Processing Of tissues Processing of specimens Processing of Tissue sections
  • 22. Processing of animal tissues Fix in appropriate fixative Wash in water / iodine alcohol Partially dehydrate in 30, 50, % grades of alcohol – 30 -90 mts each Store in 70 % or 80% alcohol
  • 23. Processing of plant tissues Fix in FAA (formalin-acetic acid-alcohol) Wash in 50% alcohol Partially dehydrate in 10, 20, 30, 40, 50 & 60% Alcohol grades – 20 mts each Store in 70% alcohol
  • 24. Paraffin wax technique of tissue blocks  Dehydration-the alcohol method -the acetone method - the dioxane (diethylene dioxide) method  Clearing- de-alcoholisation -clearing agents- xylene, benzene, toluene, chloroform.  Embedding- blocking – out in wax-wax impregnation
  • 25. Paraffin wax technique of tissue blocks  wax-wax impregnation- It can be cold wax infiltration and melted wax infiltration.  Complete wax infiltration is essential for the production of good sections.  Hard tissues requires a higher melting point wax.  Number wax changes and time in each wax change, depend upon the density and size of the tissue.  Embedding media – wax, gelatin, celloidin, polyester wax.
  • 26. Cutting of tissue sections or microtomy Rotary microtome Ordinary Rocking microtome microtome Freezing Sliding microtome Microtome/ microtome cryostat Ultra - microtome
  • 27. Microtomes  The microtomes cut the tissue at a pre- determined uniform thickness.  These instruments are designed for the accurate and serial cutting of thin slices of tissue.  Several models are available – sliding, rotary, rocking ultra- thin microtomes.
  • 28. Cambridge rocking microtome  It consists of a heavy base and two arms ; the lower arm rests on a column and supports the upper, both being pivoted on knife edges which acts a fulcrum.  The upper arm carries the block holder.  There is an adjustable cord.  The feed mechanism is graduated in units of 1or 2 um.
  • 29. The rotary microtome  The section cutting is effected by the vertical rise and fall of the object against an fixed knife edge.  The block holder is equipped with adjustable screws.  The block is parallel to the microtome knife.  The knife holder is movable.
  • 30. The sliding microtome  The block remains stationary, while the microtome knife moves during the process of sectioning.
  • 31. The freezing microtome  The optimum cutting temperature is -20 degree Celsius.  The freezing of the tissues is done by the carbon dioxide gas.
  • 32. The cryostat  Sectioning is done on unfixed tissue.  The microtome is housed in a deep freezer cabinet.  The temperature can be maintained between -15 to -30 degree Celsius.
  • 33. Paraffin processing of tissue Post-fixation Initial fixation treatment dehydration Wax De- Complete infiltration alcoholization dehydration Wax Trimming the block microtomy embedding
  • 34. Processing of paraffin sections Hydration Down-grading – Drying of sections De-paraffinization Graded alcohol series Staining Dehydration De-alcoholization -primary staining Up-grading- And clearing -counter-staining Graded alcohol series Mounting Observation In a medium with In a microscope Cover glass
  • 35. Staining  Staining is used to obtain contrast between the constituent parts of a tissue section.  The depth of colouration is affected by chemical affinity, density, and permeability.  Certain stains are metachromatic –i.e. they are capable of imparting one colour to certain constituents and another to others.
  • 36. Mordanting  The salts of certain metals are capable of radically alter the behavior of particular stains.  These salts are called ‘mordants’.  A mordant is capable entering into chemical combination with a stain.  The resulting substance is called ‘a lake’.
  • 37. Kinds of staining Progressive staining Retrogressive staining The tissue is left in the The tissue is over stain until the desired stained and decolorized depth of color is using differentiating obtained solution Direct staining Counter staining The stain combines Two stains are applied directly with cell one by one with proper structures destaining in-between.
  • 38. Kinds of staining -2 Acidic Basic Neutral stains stains stains A colored organic A colored organic A colored organic acid combined base combined acid is linked with a metal. with uncolored chemically to a acetate, chloride colored organic or sulphate base. radical. These are dissolved in water or alcohol. They are dissolved They tend to stain in absolute They tend to stain nucleus. alcohol. the cytoplasm.
  • 39. Common double stains Animal • Borax carmine and eosin Y • Haematoxylin and eosin Y • Haematoxylin and van tissues Geison stain Plant • Haematoxylin and eosin • Safranin and light green tissues • Safranin and haematoxylin
  • 40. Good general stain for animal tissues stain solvent effect Pico carmine water Nucleus-red Cytoplasm-yellow Borax carmine alcohol Nucleus-pink Delafield alcohol Nucleus - blue haematoxylin Haemalum water Nucleus - blue Eosin Y Water or alcohol Cytoplasm - pink
  • 41. Clearing agent • It makes the processed Clearing tissue transparent. agent • Removes alcohol from tissue sections.
  • 42. Dr.B.Victor is a highly experienced professor, recently retired from the reputed educational institution- St. Xavier’ s College, Palayamkottai, India-627001.  He was the dean of sciences, IQAC coordinator and assistant controller of examinations.  He has more than 32 years of teaching and research experience  He has taught a diversity of courses and guided 12 Ph.D scholars.  He is an expert in histological techniques and photo micrography.  send your comments to : bonfiliusvictor@gmail.com
  • 43. Thank you for watching