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Advancements of Medical
Biotechnology in Gene Therapy



   Presented by
   Dr. B. Victor., Ph. D
   Email : bonfiliusvictor@gmail.com
   Blog: bonvictor.blogspot.com
Presentation outline
   Human genetic disorders-types, features.
   Gene therapy- definition, kinds and history.
   Somatic cell and Germ line gene therapy
   Ex vivo and In vivo gene therapy
   Gene delivery vectors: Viral and Non-viral vectors.
   Gene targeting
   Naked DNA gene therapy, post-natal gene therapy
    and pre-natal gene therapy
   Risks and recent developments.
   Conclusion
Human genetic disorders
Kinds of human genetic
disorders
DNA / gene mutation
Functional or
non-functional DNA
        Genes are sequences of bases.
        Genes replicate exactly.
        Gene is transcribed into mRNA.
        mRNA is translated into Protein.
        Proteins do metabolic functions.
        Mutated genes are non-
        functional (build wrong, interact
        wrong).
        Mutated genes are inherited;
        result is genetic disease.
Basis of genetic disorder
What is a genetic disorder?
What is gene therapy?
Concepts of gene therapy
  techniques
 Replacement   of a
  abnormal gene with
  normal gene.
 Repairing the
  abnormal gene.
 Altering how that
  gene is controlled.
 Get other cells to
  take over function
  of abnormal cells.
 Inserting correct
  protein and bypass
  gene function.
Kinds of Gene Therapy
techniques
Technique of gene
therapy
Gene therapy :mechanism
Steps in gene therapy
technology
Different genetic diseases need different gene
therapy approaches
History of gene therapy :
In the beginning…

◦ In the 1980s, Scientists inserted
  human genes into a bacteria cell.
◦ Then the bacteria cell transcribed
  and translated the information into a
  protein.
◦ Then they introduced the protein
  into human cells.
The First gene therapy case was
performed on September 14th,
1990.
                 Ashanti De Silva was
                  treated for
                  SCID(Sever combined
                  immunodeficiency).
                 Doctors removed her
                  white blood cells,
                  inserted the missing
                  gene into the WBC,
                  and then put them
                  back into her blood
                  stream.
                 This strengthened her
                  immune system
                 This only worked for a
                  few months.
9/17/1999
Jesse Gelsinger, 18 years
 high school graduate with
    OTC deficiency, died
   participating in a gene
 therapy experiment at the
University of Pennsylvania in
        Philadelphia,
The first gene therapy cure
             2000 - The first gene
             therapy cure was
             reported when Alain
             Fischer (Paris)
             succeeded in totally
             correcting children with
             SCID-X1, or “bubble
             boy” syndrome
Flow chart showing
gene therapy types
Types of gene therapy;
Germ line gene therapy:
 Healthy gene is introduced into reproductive
 cells
 E.g., eggs, sperms.
Somatic cell gene therapy:
 Healthy gene is introduced into adult somatic
 cells(body cells).
 E.g., bone marrow cells, hepatic cells, central
 nervous system cells.
 Gene addition therapy :
 Functional gene is introduced into the somatic
 cell in addition to defective gene endogenous
 to the cell.
 Gene targeting :
 Inactivate a functional defective endogenous
 gene.
ex vivo(in vitro) and in
  vivo somatic gene therapy
Ex   vivo gene therapy- refers to the
  transfer of genes in cultured cells (outside
  the body) (e.g., bone marrow cells) which
  are then reintroduced into the patient.
 This technique is used for treating genetic
  diseases of blood system.
In   vivo gene therapy- the direct delivery
  of genes into the cells of a particular tissue.
 This technique is used for treating tissue –
  based genetic diseases e.g., Duchenne
  muscular dystrophy (DMD).
Steps in somatic cell
gene therapy
Human ex vivo gene therapy
Gene targeting or
targeted gene transfer
 It is a form of in-vivo site directed
 mutagenesis involving homologous
 recombination between a targeting vector
 containing one allele and an endogenous
 gene represented by a different allele.
 Gene targeting can be used either to
 inactivate a functional endogenous gene or
 to correct a defective gene.
 The first case ( in 1985) was used to disrupt
 the human b-globin gene in cultured cells.
Problems with ex-vivo method
of gene Therapy
 Problems            Risks
  Not enough cells     Cells injected may
  get desired gene     cause an immune
  to correct           response
  problem              Random insertion of
  Modified cells       retrovirus into host
  don’t last long;     chromosome- may
  need repeat          likely to interrupt the
  treatments           coding DNA.
Gene delivery
   viral Vectors
Adenoviruses
Retroviruses
Adeno-Associated Viruses (AAV)
Herpes simplex viruses
Choices of gene delivery Vectors
 Viral vectors:
   Retrovirus
   Adenovirus
   Adeno-associated virus
   Herpes Simplex Virus



 Non-viral vectors:
   Liposome
   DNA–polymer conjugates
   Naked DNA
Characteristics of ideal gene
delivery vector system

  an adequate carrying capacity.
  to be undetectable by the immune system.
  to be non-inflammatory.
  to be safe to the patients with pre-existing
 lung inflammation.
  to have an efficiency sufficient to correct
 the genetic disease.
  to have long duration of expression.
Adenovirus(non-specific
    insertion)
    Adenoviruses have double-
    stranded DNA genomes.
   Adenoviruses cause
    respiratory, intestinal, and
    eye infections in humans.
   The common cold is caused
    by an adenovirus.
   Adenovirus genome can
    accept large insertions of
    human DNA.
   Penetration into the cell is by
    endocytosis.
   The viral core migrates to the
    nucleus where the DNA enters
    through nuclear pores and
    becomes incorporated into the
    genome.
Retrovirus (non-specific
    insertion):
   Retroviruses are group
    of RNA viruses.
   Retroviruses contain two
    copies of the genome in
    each viral particle.
    Human
    immunodeficiency virus
    (HIV) is a retrovirus.
   On infection the ssRNA is
    converted into dsDNA
    copy by reverse
    transcriptase and is
    integrated into the host
    cell genome by a viral
    integrase enzyme.
Adeno-Associated Virus
    (specific insertion)
   A class of small, single-stranded
    DNA viruses that can insert their
    genetic material at a specific site
    on chromosome 19. Penetration and
    Gene Transfer mechanisms are
    similar to the Adenovirus.
   Several genetic disorders are related
    to genes on chromosome 19 (70
    known genetic disorders):
    for example:
          Alzheimer’s disease
          Leukemia
          Muscular Dystrophy
          Congenital Hypothyroidism
          Several Cancers (ovarian,
           colorectal, etc.)
Herpes simplex viruses


   A class of dsDNA
    viruses that infect a
    neurons. It has a 150
    kbp dsDNA genome. It
    consists of over 70
    genes.e.g., Cold sores
    virus
Non-viral DNA carriers:
Cationic liposomes
   Positively charged lipids interact with negatively charged
    DNA. (lipid-DNA complex).The liposome carries the
    therapeutic DNA through the target cell membrane.
    Advantages:
                a. Stable complex
                b. Can carry large sized DNA
                c. Can target to specific cells
                d. Does not induce immunological reactions.

    Disadvantages:
                a. Low transfection efficiency
                b. Transient expression
                c. Inhibited by serum
                d. Some cell toxicity
Naked DNA gene therapy
 ◦ Intramuscular and Intravascular delivery
   (liver and muscle).
 ◦ covalently closed circular form is more
   stable that   open plasmid
 ◦ Results in a prolonged low level expression
   in vivo
 ◦ Very cheap
 ◦ DNA vaccines based on naked DNA are
   unaffected by pre-existing immunity e.g.
   due to maternal antibodies
Postnatal Gene Therapy
 Correction of the deleterious effects of
  genetic disease via long term integration of
  gene sequences into a patient’s genome.
 This property makes the use of retroviral
  vectors particularly attractive when
  considering effective gene delivery to correct
  inherited monogenetic disorders.
Types of Postnatal Gene
    Therapy
   Gene replacement: non-functional or
    defective gene is replaced by a new,
    functional copy of the gene.
     Can be accomplished by homologous
      recombination.
   Gene addition: introduction of a gene
    that is able to produce a protein not
    normally expressed in the cell.
     i.e. Introduction of a so-called “suicide gene”
      into cancer cells
Prenatal or in utero gene
  therapy
Targets genetic diseases which require lifelong
  correction

The concept of fetal gene therapy is based on
  the following aims:
 avoiding early-onset manifestation of life-
  threatening genetic conditions
 achieving permanent correction of such
  diseases by stable transduction.
 Avoiding immune reactions against the
  therapeutic vector and transgene.
Prenatal gene therapy
Benefits of prenatal gene
  therapy

Provides early phenotypic correction of
 genetic disease.
Demonstration of long-term postnatal
 therapeutic protein production.
Tolerance to the transgenic protein
 can be induced by in utero expression.
Risks of Gene Therapy
 New  gene might be inserted into wrong
  location in the DNA (misfire).
 Other genes may be accidentally
  delivered to the cell.
 The deactivated vector virus may be
  contagious.
 The viral vectors cause toxicity and
  inflammatory responses.
 The vector viruses can infect more than
  one type of cell.
 Over-expression of missing protein.
 Immune system complications.
Recent Developments
   Genes get into brain using liposomes
    coated in polymer call polyethylene
    glycol
     potential for treating Parkinson’s disease
   RNA interference or gene silencing to
    treat Huntington’s
     siRNAs used to degrade RNA of particular
      sequence
     abnormal protein wont be produced
 Create tiny liposomes that can carry
  therapeutic DNA through pores of
  nuclear membrane
 Sickle cell successfully treated in mice
   Dr.B.Victor is a highly experienced professor,
    recently retired from the reputed educational
    institution- St. Xavier’ s College,
    Palayamkottai, India-627001.
   He was the dean of sciences, IQAC
    coordinator and assistant controller of
    examinations.
   He has more than 32 years of teaching and
    research experience
   He has taught a diversity of courses and
    guided 12 Ph.D scholars.
    send your comments to :
    bonfiliusvictor@gmail.com
Advancements in Gene Therapy Techniques

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Influencing policy (training slides from Fast Track Impact)
 

Advancements in Gene Therapy Techniques

  • 1. Advancements of Medical Biotechnology in Gene Therapy Presented by Dr. B. Victor., Ph. D Email : bonfiliusvictor@gmail.com Blog: bonvictor.blogspot.com
  • 2. Presentation outline  Human genetic disorders-types, features.  Gene therapy- definition, kinds and history.  Somatic cell and Germ line gene therapy  Ex vivo and In vivo gene therapy  Gene delivery vectors: Viral and Non-viral vectors.  Gene targeting  Naked DNA gene therapy, post-natal gene therapy and pre-natal gene therapy  Risks and recent developments.  Conclusion
  • 4. Kinds of human genetic disorders
  • 5. DNA / gene mutation
  • 6. Functional or non-functional DNA Genes are sequences of bases. Genes replicate exactly. Gene is transcribed into mRNA. mRNA is translated into Protein. Proteins do metabolic functions. Mutated genes are non- functional (build wrong, interact wrong). Mutated genes are inherited; result is genetic disease.
  • 7. Basis of genetic disorder
  • 8. What is a genetic disorder?
  • 9. What is gene therapy?
  • 10. Concepts of gene therapy techniques  Replacement of a abnormal gene with normal gene.  Repairing the abnormal gene.  Altering how that gene is controlled.  Get other cells to take over function of abnormal cells.  Inserting correct protein and bypass gene function.
  • 11. Kinds of Gene Therapy techniques
  • 14. Steps in gene therapy technology
  • 15. Different genetic diseases need different gene therapy approaches
  • 16. History of gene therapy : In the beginning… ◦ In the 1980s, Scientists inserted human genes into a bacteria cell. ◦ Then the bacteria cell transcribed and translated the information into a protein. ◦ Then they introduced the protein into human cells.
  • 17. The First gene therapy case was performed on September 14th, 1990.  Ashanti De Silva was treated for SCID(Sever combined immunodeficiency).  Doctors removed her white blood cells, inserted the missing gene into the WBC, and then put them back into her blood stream.  This strengthened her immune system  This only worked for a few months.
  • 18. 9/17/1999 Jesse Gelsinger, 18 years high school graduate with OTC deficiency, died participating in a gene therapy experiment at the University of Pennsylvania in Philadelphia,
  • 19. The first gene therapy cure  2000 - The first gene therapy cure was reported when Alain Fischer (Paris) succeeded in totally correcting children with SCID-X1, or “bubble boy” syndrome
  • 20. Flow chart showing gene therapy types
  • 21. Types of gene therapy; Germ line gene therapy: Healthy gene is introduced into reproductive cells E.g., eggs, sperms. Somatic cell gene therapy: Healthy gene is introduced into adult somatic cells(body cells). E.g., bone marrow cells, hepatic cells, central nervous system cells. Gene addition therapy : Functional gene is introduced into the somatic cell in addition to defective gene endogenous to the cell. Gene targeting : Inactivate a functional defective endogenous gene.
  • 22. ex vivo(in vitro) and in vivo somatic gene therapy Ex vivo gene therapy- refers to the transfer of genes in cultured cells (outside the body) (e.g., bone marrow cells) which are then reintroduced into the patient.  This technique is used for treating genetic diseases of blood system. In vivo gene therapy- the direct delivery of genes into the cells of a particular tissue.  This technique is used for treating tissue – based genetic diseases e.g., Duchenne muscular dystrophy (DMD).
  • 23. Steps in somatic cell gene therapy
  • 24. Human ex vivo gene therapy
  • 25. Gene targeting or targeted gene transfer It is a form of in-vivo site directed mutagenesis involving homologous recombination between a targeting vector containing one allele and an endogenous gene represented by a different allele. Gene targeting can be used either to inactivate a functional endogenous gene or to correct a defective gene. The first case ( in 1985) was used to disrupt the human b-globin gene in cultured cells.
  • 26. Problems with ex-vivo method of gene Therapy Problems Risks Not enough cells Cells injected may get desired gene cause an immune to correct response problem Random insertion of Modified cells retrovirus into host don’t last long; chromosome- may need repeat likely to interrupt the treatments coding DNA.
  • 27. Gene delivery viral Vectors Adenoviruses Retroviruses Adeno-Associated Viruses (AAV) Herpes simplex viruses
  • 28. Choices of gene delivery Vectors Viral vectors: Retrovirus Adenovirus Adeno-associated virus Herpes Simplex Virus Non-viral vectors: Liposome DNA–polymer conjugates Naked DNA
  • 29. Characteristics of ideal gene delivery vector system an adequate carrying capacity. to be undetectable by the immune system. to be non-inflammatory. to be safe to the patients with pre-existing lung inflammation. to have an efficiency sufficient to correct the genetic disease. to have long duration of expression.
  • 30. Adenovirus(non-specific insertion) Adenoviruses have double- stranded DNA genomes.  Adenoviruses cause respiratory, intestinal, and eye infections in humans.  The common cold is caused by an adenovirus.  Adenovirus genome can accept large insertions of human DNA.  Penetration into the cell is by endocytosis.  The viral core migrates to the nucleus where the DNA enters through nuclear pores and becomes incorporated into the genome.
  • 31. Retrovirus (non-specific insertion):  Retroviruses are group of RNA viruses.  Retroviruses contain two copies of the genome in each viral particle.  Human immunodeficiency virus (HIV) is a retrovirus.  On infection the ssRNA is converted into dsDNA copy by reverse transcriptase and is integrated into the host cell genome by a viral integrase enzyme.
  • 32. Adeno-Associated Virus (specific insertion)  A class of small, single-stranded DNA viruses that can insert their genetic material at a specific site on chromosome 19. Penetration and Gene Transfer mechanisms are similar to the Adenovirus.  Several genetic disorders are related to genes on chromosome 19 (70 known genetic disorders):  for example:  Alzheimer’s disease  Leukemia  Muscular Dystrophy  Congenital Hypothyroidism  Several Cancers (ovarian, colorectal, etc.)
  • 33. Herpes simplex viruses  A class of dsDNA viruses that infect a neurons. It has a 150 kbp dsDNA genome. It consists of over 70 genes.e.g., Cold sores virus
  • 34. Non-viral DNA carriers: Cationic liposomes  Positively charged lipids interact with negatively charged DNA. (lipid-DNA complex).The liposome carries the therapeutic DNA through the target cell membrane. Advantages: a. Stable complex b. Can carry large sized DNA c. Can target to specific cells d. Does not induce immunological reactions. Disadvantages: a. Low transfection efficiency b. Transient expression c. Inhibited by serum d. Some cell toxicity
  • 35. Naked DNA gene therapy ◦ Intramuscular and Intravascular delivery (liver and muscle). ◦ covalently closed circular form is more stable that open plasmid ◦ Results in a prolonged low level expression in vivo ◦ Very cheap ◦ DNA vaccines based on naked DNA are unaffected by pre-existing immunity e.g. due to maternal antibodies
  • 36. Postnatal Gene Therapy  Correction of the deleterious effects of genetic disease via long term integration of gene sequences into a patient’s genome.  This property makes the use of retroviral vectors particularly attractive when considering effective gene delivery to correct inherited monogenetic disorders.
  • 37. Types of Postnatal Gene Therapy  Gene replacement: non-functional or defective gene is replaced by a new, functional copy of the gene.  Can be accomplished by homologous recombination.  Gene addition: introduction of a gene that is able to produce a protein not normally expressed in the cell.  i.e. Introduction of a so-called “suicide gene” into cancer cells
  • 38. Prenatal or in utero gene therapy Targets genetic diseases which require lifelong correction The concept of fetal gene therapy is based on the following aims:  avoiding early-onset manifestation of life- threatening genetic conditions  achieving permanent correction of such diseases by stable transduction.  Avoiding immune reactions against the therapeutic vector and transgene.
  • 40. Benefits of prenatal gene therapy Provides early phenotypic correction of genetic disease. Demonstration of long-term postnatal therapeutic protein production. Tolerance to the transgenic protein can be induced by in utero expression.
  • 41. Risks of Gene Therapy  New gene might be inserted into wrong location in the DNA (misfire).  Other genes may be accidentally delivered to the cell.  The deactivated vector virus may be contagious.  The viral vectors cause toxicity and inflammatory responses.  The vector viruses can infect more than one type of cell.  Over-expression of missing protein.  Immune system complications.
  • 42. Recent Developments  Genes get into brain using liposomes coated in polymer call polyethylene glycol  potential for treating Parkinson’s disease  RNA interference or gene silencing to treat Huntington’s  siRNAs used to degrade RNA of particular sequence  abnormal protein wont be produced  Create tiny liposomes that can carry therapeutic DNA through pores of nuclear membrane  Sickle cell successfully treated in mice
  • 43. Dr.B.Victor is a highly experienced professor, recently retired from the reputed educational institution- St. Xavier’ s College, Palayamkottai, India-627001.  He was the dean of sciences, IQAC coordinator and assistant controller of examinations.  He has more than 32 years of teaching and research experience  He has taught a diversity of courses and guided 12 Ph.D scholars.  send your comments to : bonfiliusvictor@gmail.com

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