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Basic Overview of
Information Technology and
uses in Medicine and
Dentistry

  Dr Ebtissam Al-Madi
Basic Overview of
 Information Technology and
     uses in Medicine and
           Dentistry
1. Types of Computers
2. Data Storage in Computers
3. Computer Hardware and Software
4. Computer Networks
5. Software Engineering
6. Challenges to Biomedical Computing

     Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics   2
                                         182 DEN
Informatics is not about
           technology
• Technology is essential for acquisition
  and use of the focus: information
• Decisions about technology impact how
  information is managed
• Focus should be user-centered, not
  technology centered
• “Old” technology is not necessarily bad
  if it still meets needs and is supportable
• “New” technology can introduce new
  problems
                    Al-Madi EM. Basic Overview of Information      3
                   Technology. Concept of Health Informatics 182
Types of computers
• Most powerful
   – Mainframes – largest and
     most expensive
     computers that serve
     many users
   – Supercomputers –
     powerful computers
     designed for massive
     processing and
     computation
• Servers
   – Computers that serve
     many users and handle
     many transactions
   – Any computer from a PC
     to a mainframe can act
     as a server

        Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics   4
                                            182 DEN
Batman Laptop 

• Personal computers (PCs)
   – Desktop and laptop and
     Apple Macintosh computers
   – Continue to increase in
     power, especially when on
     computer networks
   – Have essentially become a
     commodity
   – Intel shipped its one billionth
     computer chip in 2003 (Intel,
     2003)
• Tablet computers
   – Screen and power of laptop
     computer but even more
     portable
   – Touted as beneficial in health
     care but penetration remains
     modest (Malkary, 2004)

                            Al-Madi EM. Basic Overview of Information      5
                           Technology. Concept of Health Informatics 182
“Computers” are getting smaller
• Personal digital assistants (PDAs)
   – Hand-held computers with high
     portability
   – Most popular platforms are Palm
     OS and Windows forHandhelds
     (Windows Mobile)
   – Primary form of input is mostly
     hand-writing recognition
   – Increasingly have wireless network
     capability
   – Highly popular among clinicians
     but limited by screen size,
• Cell phones
   – Increasingly have cameras,
     Internet access, etc.
   – Value outweighs possible risk in
     health care settings
                                                           Waiting for it 

                              Al-Madi EM. Basic Overview of Information       6
                             Technology. Concept of Health Informatics 182
How powerful are computers
            getting?
• Everything from speed to size to cost per unit of
  power doubles every 18 Months.
                           (Moore, 1965; Intel, 2004)




                          Al-Madi EM. Basic Overview of Information      7
                         Technology. Concept of Health Informatics 182
Data Storage in Computers
Virtually all modern computers are digital, as opposed to
   analog
• Digital means that
   – Most fundamental unit is discrete
   – Unit is the binary digit or bit, which can assume the values 0
     or 1
   – Or off/on, false/true, etc..
   – A byte is a sequence of 8 bits (and can take on 28 or 256
     values)
• In contrast, analog systems have values on continuous
  scale
• Examples of digital vs. analog
   – Timekeeping
   – Calculators vs. slide rules
   – Audio – LPs vs. CDs


              Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics   8
                                                  182 DEN
Digital concepts – data
               representation
•   Bit sequences are used to represent
    numbers, text, images, and program
    instructions
•   All these sequences are stored in
    memory and architecture determines
    which is which.
•   Integer numbers are represented by
    straight sequences of bits.
•   Text is represented by codes (Unicode)
•   Images are represented by pixels
         Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics   9
                                             182 DEN
Is a picture worth a thousand
 words? Compare storage sizes
         Text                                                    Image
• For text, each                                        • A high-quality
  character is one                                        display of a page
  byte                                                    requires about 1,200
• A single page may                                       by 800 pixels, taking
  have an average of                                      up (in B&W) around
  50 characters per                                       120,000 bytes
  line over its 60 lines,                               • Adding 8-bit color
  taking up about                                         would increase the
  3,000 bytes                                             size to nearly one
                                                          million bytes
       Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics   10
                                           182 DEN
Digital points of reference

• Chest x-ray
1200 x 800 pixels= 960,000 bytes
• Average-sized text book=1-5 megabytes
• Library of Congress= 20 terabytes




                 Al-Madi EM. Basic Overview of Information      11
                Technology. Concept of Health Informatics 182
Sizes of storage media


              CD
Floppy       disks              Flash                DVD                Hard Mainframe &
 Disk                          Memory                Disks              Disks Server Hard Disk




1,440 K      640-                  1-20               4.2 GB               100s             Terabyte ++
            700 MB                 GB                                       GB




          Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics             12
                                              182 DEN
Computer Hardware and
             Software
     Hardware                              Software
• Physical parts of                 • Instructions for
  Computer                            computer
  – Central processing                     – Operating system
    unit                                   – Applications
  (CPU)                                    – Programming
  – Memory                                   languages and
  – Auxiliary storage                        development tools
  – Input and output
    devices


                          Al-Madi EM. Basic Overview of Information      13
                         Technology. Concept of Health Informatics 182
Auxiliary storage

        Active                         Archival
• Active storage is            • Archival storage is
  used for information           information needed
  needed all the time            less urgently, e.g.,
                                 backup or older
                                 information




                     Al-Madi EM. Basic Overview of Information      14
                    Technology. Concept of Health Informatics 182
Input and output devices

         Input devices
•   Most common device
    is the keyboard
•   Mouse and trackpad
•   Pen input
•   Voice input

    Output devices
• Monitor and printer
• Computer speech
                                                         Input devices
        Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics   15
                                            182 DEN
Computer software – operating
            systems
• Provide file, display,         • Some operating
  networking, etc.,                systems
  services to users and                 –    Windows
  programmers                           –    Macintosh OS
• Users get file                        –    Unix
  management, set-up                    –    Open-source Linux
  and maintenance,                      –    Novell Netware
  utilities                             –    PalmOS, Windows for
• Programmers get                            Handhelds (Windows
  standard interface to                      Mobile)
  various services such
  as file access,
  display, network
  connection, etc.

                       Al-Madi EM. Basic Overview of Information      16
                      Technology. Concept of Health Informatics 182
Programming languages
• Computer programs run in            • C, C++ – used in most
  machine language, the                 modern applications
  code of bits that gives             • MUMPS – used in many
  instructions for moving               early medical applications
  and manipulating data               • Basic – used to be
• “High level” computer                 common in PCs
  languages operate at a              • Visual Basic used across
  higher level of abstraction,          Microsoft applications
  hiding the complexity of
  moving and manipulating             • Perl, Python, and others –
  data                                  “scripting” languages for
                                        Unix and Web
                                      • Java – attempt to create
                                        standard language for
                                        Web applications



                            Al-Madi EM. Basic Overview of Information      17
                           Technology. Concept of Health Informatics 182
Open-source software
                                    Open source software in
                                           health care
• Freely available and is          • General
  managed by some sort                    – www.sourceforge.net
  of standardizing entity          • Medical
• Examples: Linux,                        – Veterans Administration
  mySQL, openEHR                            system Vista –
                                            http://www1.va.gov/CPR
                                            Sdemo/
                                          – OpenEHR –
                                            www.openehr.org
                                          – www.freemedsoftware.or
                                            g
                                          – www.linuxmednews.org


                         Al-Madi EM. Basic Overview of Information      18
                        Technology. Concept of Health Informatics 182
Computer networks
• Before Internet era, computers were
  either
  – Standalone (in the case of PCs)
  – Hard-wired terminals connected to the
    central unit (in the case of mainframes)
• Most rapidly evolving and expanding
  technology today is the computer
  network


                     Al-Madi EM. Basic Overview of Information      19
                    Technology. Concept of Health Informatics 182
The Internet
• Worldwide computer network bound together
  by TCP/IP
• Not a single network, but many “internetworks”
• Every device on the Internet has an Internet
  Protocol (IP) address
• Internet-related terms
  – Intranet – Network local to organization that uses
    Internet technology
  – Extranet – Network limited to associates of an
    organization
  – Virtual private network (VPN) – the “new” WAN,
    allows distant network to appear local

                        Al-Madi EM. Basic Overview of Information      20
                       Technology. Concept of Health Informatics 182
Software applications on the
    Internet
• Electronic mail
• World Wide Web
• Instant messaging
• Application service provider (ASP)
  applications – store application and data
  remotely
• PC is a terminal:
     – Advantage – connect from anywhere on
       network, up to- date version, data integrity
     – Disadvantage – constrained by network
       bandwidth and availability
                          Al-Madi EM. Basic Overview of Information      21
                         Technology. Concept of Health Informatics 182
• Internet and broadband use is higher
  among
  – Rich vs. poor
  – Younger vs. older
  – Developed vs. developing countries
  – Urban vs. rural
  – Caucasian and Asian vs. other ethnic
    groups
• Use growing proportionately among
  various ethnic and age groups
                    Al-Madi EM. Basic Overview of Information      22
                   Technology. Concept of Health Informatics 182
Networking Health
• Nothing about health applications is
  unique, i.e., we don’t need a separate
  “health Internet,” but current infrastructure
  is inadequate for many applications and
  priorities
• “Availability” of networks is more important
  than “bandwidth” for most clinical
  applications
  – Can be compromised by the failure of
    individual components
  – Overload of system
  – Hostile attacks (hacking, viruses)

                     Al-Madi EM. Basic Overview of Information      23
                    Technology. Concept of Health Informatics 182
Important issues for system
            design
• Quality and style of interface
   – Must be clear and consistent
• Convenience and accessibility
   – Devices where needed and in adequate numbers
• Speed and response time
   – Essential for busy clinicians
• Reliability
   – Crucial as we become more dependent on them
• Security
   – Essential as amount of data and connectivity grows
• Integration
   – Interoperability of systems and data essential

                           Al-Madi EM. Basic Overview of Information      24
                          Technology. Concept of Health Informatics 182
Challenges to Biomedical
                  Computing
•   Software reliability and safety
•   Software bugs
•   General system security
•   Spam email
•   Passwords
•   Persistent data
•   Intellectual property and patents


                    Al-Madi EM. Basic Overview of Information      25
                   Technology. Concept of Health Informatics 182
This weeks assignments

1. View this lecture online for review.
2. Read article:
http://www.grassrootsdesign.com/intro/
This learner's guide is a long term project inspired by twelve years of
   teaching computers. The guide is being developed and updated as time
   permits.
3. Participate in week 3 discussion.
4. Answer Quiz week 3.




   View          Read             Discuss                         Quiz
                                Al-Madi EM. Basic Overview of Information      26
                               Technology. Concept of Health Informatics 182
• Please Post on discussion board as a
  new thread or email me at:
  ealmadi@ksu.edu.sa
• Good Luck
                      Dr Ebtissam AL-Madi

     Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics   27
                                         182 DEN

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Basic overview of information technology and uses

  • 1. Basic Overview of Information Technology and uses in Medicine and Dentistry Dr Ebtissam Al-Madi
  • 2. Basic Overview of Information Technology and uses in Medicine and Dentistry 1. Types of Computers 2. Data Storage in Computers 3. Computer Hardware and Software 4. Computer Networks 5. Software Engineering 6. Challenges to Biomedical Computing Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics 2 182 DEN
  • 3. Informatics is not about technology • Technology is essential for acquisition and use of the focus: information • Decisions about technology impact how information is managed • Focus should be user-centered, not technology centered • “Old” technology is not necessarily bad if it still meets needs and is supportable • “New” technology can introduce new problems Al-Madi EM. Basic Overview of Information 3 Technology. Concept of Health Informatics 182
  • 4. Types of computers • Most powerful – Mainframes – largest and most expensive computers that serve many users – Supercomputers – powerful computers designed for massive processing and computation • Servers – Computers that serve many users and handle many transactions – Any computer from a PC to a mainframe can act as a server Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics 4 182 DEN
  • 5. Batman Laptop  • Personal computers (PCs) – Desktop and laptop and Apple Macintosh computers – Continue to increase in power, especially when on computer networks – Have essentially become a commodity – Intel shipped its one billionth computer chip in 2003 (Intel, 2003) • Tablet computers – Screen and power of laptop computer but even more portable – Touted as beneficial in health care but penetration remains modest (Malkary, 2004) Al-Madi EM. Basic Overview of Information 5 Technology. Concept of Health Informatics 182
  • 6. “Computers” are getting smaller • Personal digital assistants (PDAs) – Hand-held computers with high portability – Most popular platforms are Palm OS and Windows forHandhelds (Windows Mobile) – Primary form of input is mostly hand-writing recognition – Increasingly have wireless network capability – Highly popular among clinicians but limited by screen size, • Cell phones – Increasingly have cameras, Internet access, etc. – Value outweighs possible risk in health care settings Waiting for it  Al-Madi EM. Basic Overview of Information 6 Technology. Concept of Health Informatics 182
  • 7. How powerful are computers getting? • Everything from speed to size to cost per unit of power doubles every 18 Months. (Moore, 1965; Intel, 2004) Al-Madi EM. Basic Overview of Information 7 Technology. Concept of Health Informatics 182
  • 8. Data Storage in Computers Virtually all modern computers are digital, as opposed to analog • Digital means that – Most fundamental unit is discrete – Unit is the binary digit or bit, which can assume the values 0 or 1 – Or off/on, false/true, etc.. – A byte is a sequence of 8 bits (and can take on 28 or 256 values) • In contrast, analog systems have values on continuous scale • Examples of digital vs. analog – Timekeeping – Calculators vs. slide rules – Audio – LPs vs. CDs Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics 8 182 DEN
  • 9. Digital concepts – data representation • Bit sequences are used to represent numbers, text, images, and program instructions • All these sequences are stored in memory and architecture determines which is which. • Integer numbers are represented by straight sequences of bits. • Text is represented by codes (Unicode) • Images are represented by pixels Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics 9 182 DEN
  • 10. Is a picture worth a thousand words? Compare storage sizes Text Image • For text, each • A high-quality character is one display of a page byte requires about 1,200 • A single page may by 800 pixels, taking have an average of up (in B&W) around 50 characters per 120,000 bytes line over its 60 lines, • Adding 8-bit color taking up about would increase the 3,000 bytes size to nearly one million bytes Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics 10 182 DEN
  • 11. Digital points of reference • Chest x-ray 1200 x 800 pixels= 960,000 bytes • Average-sized text book=1-5 megabytes • Library of Congress= 20 terabytes Al-Madi EM. Basic Overview of Information 11 Technology. Concept of Health Informatics 182
  • 12. Sizes of storage media CD Floppy disks Flash DVD Hard Mainframe & Disk Memory Disks Disks Server Hard Disk 1,440 K 640- 1-20 4.2 GB 100s Terabyte ++ 700 MB GB GB Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics 12 182 DEN
  • 13. Computer Hardware and Software Hardware Software • Physical parts of • Instructions for Computer computer – Central processing – Operating system unit – Applications (CPU) – Programming – Memory languages and – Auxiliary storage development tools – Input and output devices Al-Madi EM. Basic Overview of Information 13 Technology. Concept of Health Informatics 182
  • 14. Auxiliary storage Active Archival • Active storage is • Archival storage is used for information information needed needed all the time less urgently, e.g., backup or older information Al-Madi EM. Basic Overview of Information 14 Technology. Concept of Health Informatics 182
  • 15. Input and output devices Input devices • Most common device is the keyboard • Mouse and trackpad • Pen input • Voice input Output devices • Monitor and printer • Computer speech Input devices Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics 15 182 DEN
  • 16. Computer software – operating systems • Provide file, display, • Some operating networking, etc., systems services to users and – Windows programmers – Macintosh OS • Users get file – Unix management, set-up – Open-source Linux and maintenance, – Novell Netware utilities – PalmOS, Windows for • Programmers get Handhelds (Windows standard interface to Mobile) various services such as file access, display, network connection, etc. Al-Madi EM. Basic Overview of Information 16 Technology. Concept of Health Informatics 182
  • 17. Programming languages • Computer programs run in • C, C++ – used in most machine language, the modern applications code of bits that gives • MUMPS – used in many instructions for moving early medical applications and manipulating data • Basic – used to be • “High level” computer common in PCs languages operate at a • Visual Basic used across higher level of abstraction, Microsoft applications hiding the complexity of moving and manipulating • Perl, Python, and others – data “scripting” languages for Unix and Web • Java – attempt to create standard language for Web applications Al-Madi EM. Basic Overview of Information 17 Technology. Concept of Health Informatics 182
  • 18. Open-source software Open source software in health care • Freely available and is • General managed by some sort – www.sourceforge.net of standardizing entity • Medical • Examples: Linux, – Veterans Administration mySQL, openEHR system Vista – http://www1.va.gov/CPR Sdemo/ – OpenEHR – www.openehr.org – www.freemedsoftware.or g – www.linuxmednews.org Al-Madi EM. Basic Overview of Information 18 Technology. Concept of Health Informatics 182
  • 19. Computer networks • Before Internet era, computers were either – Standalone (in the case of PCs) – Hard-wired terminals connected to the central unit (in the case of mainframes) • Most rapidly evolving and expanding technology today is the computer network Al-Madi EM. Basic Overview of Information 19 Technology. Concept of Health Informatics 182
  • 20. The Internet • Worldwide computer network bound together by TCP/IP • Not a single network, but many “internetworks” • Every device on the Internet has an Internet Protocol (IP) address • Internet-related terms – Intranet – Network local to organization that uses Internet technology – Extranet – Network limited to associates of an organization – Virtual private network (VPN) – the “new” WAN, allows distant network to appear local Al-Madi EM. Basic Overview of Information 20 Technology. Concept of Health Informatics 182
  • 21. Software applications on the Internet • Electronic mail • World Wide Web • Instant messaging • Application service provider (ASP) applications – store application and data remotely • PC is a terminal: – Advantage – connect from anywhere on network, up to- date version, data integrity – Disadvantage – constrained by network bandwidth and availability Al-Madi EM. Basic Overview of Information 21 Technology. Concept of Health Informatics 182
  • 22. • Internet and broadband use is higher among – Rich vs. poor – Younger vs. older – Developed vs. developing countries – Urban vs. rural – Caucasian and Asian vs. other ethnic groups • Use growing proportionately among various ethnic and age groups Al-Madi EM. Basic Overview of Information 22 Technology. Concept of Health Informatics 182
  • 23. Networking Health • Nothing about health applications is unique, i.e., we don’t need a separate “health Internet,” but current infrastructure is inadequate for many applications and priorities • “Availability” of networks is more important than “bandwidth” for most clinical applications – Can be compromised by the failure of individual components – Overload of system – Hostile attacks (hacking, viruses) Al-Madi EM. Basic Overview of Information 23 Technology. Concept of Health Informatics 182
  • 24. Important issues for system design • Quality and style of interface – Must be clear and consistent • Convenience and accessibility – Devices where needed and in adequate numbers • Speed and response time – Essential for busy clinicians • Reliability – Crucial as we become more dependent on them • Security – Essential as amount of data and connectivity grows • Integration – Interoperability of systems and data essential Al-Madi EM. Basic Overview of Information 24 Technology. Concept of Health Informatics 182
  • 25. Challenges to Biomedical Computing • Software reliability and safety • Software bugs • General system security • Spam email • Passwords • Persistent data • Intellectual property and patents Al-Madi EM. Basic Overview of Information 25 Technology. Concept of Health Informatics 182
  • 26. This weeks assignments 1. View this lecture online for review. 2. Read article: http://www.grassrootsdesign.com/intro/ This learner's guide is a long term project inspired by twelve years of teaching computers. The guide is being developed and updated as time permits. 3. Participate in week 3 discussion. 4. Answer Quiz week 3. View Read Discuss Quiz Al-Madi EM. Basic Overview of Information 26 Technology. Concept of Health Informatics 182
  • 27. • Please Post on discussion board as a new thread or email me at: ealmadi@ksu.edu.sa • Good Luck Dr Ebtissam AL-Madi Al-Madi EM. Basic Overview of Information Technology. Concept of Health Informatics 27 182 DEN